BioThings API
mygene.info

  1. New default behavior for 'species' parameter

    MyGene.info API supports both "/gene" and "/query" endpoints. On its /query endpoint, an optional species parameter allows users to pass one or multiple species (as common species names or taxonomy ids) to filter down the query results. Previously, the default species were set to "human,mouse,rat". This meant…
    on mygene.info species - Comments

  2. UMLS identifiers now available

    The Unified Medical Language System UMLS consolidates and standardizes health and biomedical vocabularies from several important resources to enable interoperability between computer systems. Now you can use MyGene.info service to obtain UMLS Concept Unique Identifiers (CUIs). Here are a few quick examples: http://mygene.info/v3/query?q=1017&…
    on mygene.info UMLS - Comments

  3. What can you build with MyGene/MyVariant annotation services?

    Now that’s how you use MyGene/MyVariant Services--Check out this Jbrowse plugin! One of our pride points for being able to pool, standardize, and share gene and variant annotation data as a service, is that our service is fast! The reason that MyGene.info and MyVariant.info are made…
    on myvariant.info client mygene.info - Comments

  4. Pathway data updated in MyGene.info

    Just a quick highlight of our recent update on all pathway data in MyGene.info API. Thanks to the excellent pathway/interaction database from ConsensusPathDB, we updated all 10 pathway sub-fields (listed below) for three species (human, mouse and yeast). The underlying data were updated up to Jan 2017 (ConsensusPathDB…
    on data release mygene.info - Comments